Gene Expression by Cell Type
Select a bar to inspect expression values.
| Cell Type | Group | Mean TPM | SEM | Median TPM | Max TPM | Samples |
|---|
Perseus
curated information on pancreatic gene regulation and its role in diabetes risk
Perseus
Data
Perseus
About
Perseus
Entities
Gene page
Cis-regulatory elements
| cRE | Active Linked Cell Types | ABC Score | Target TSS | Distance to TSS |
|---|
Credible Set Variants in Linked cREs
Differential Expression by Trait
| Trait | Cell Type | log2 Fold Change | lfcSE | Base Mean | P-value | Adjusted P-value |
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Pathways
| Source | Pathway | Pathway ID | Definition | Genes |
|---|
Cell-Level Browser
Cis-regulatory element page
Chromosome
Start
End
Genome Browser
Donor CPM by Cell Type
| Cell Type | Group | Mean CPM | SEM | Q1 CPM | Median CPM | Q3 CPM | Min CPM | Max CPM | Donors |
|---|
Target Genes by Cell Type
| Cell Type | Target Gene | ABC Score | Target TSS | Distance to TSS |
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Credible Set Variants and Predicted Effects
Variant page
Position
Alleles
rsID
Genome Browser
Credible Sets
| Trait | Locus ID | Beta | P-value | PIP |
|---|
Predicted Effects
| Cell Type | Alt-allele Predicted logFC | abs logFC x JSD | Effect P-value | Significant |
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Cell type page
Most Cell-Type Specific Genes
| Rank | Gene | Specificity | Entropy | Cell Type Share | Mean TPM |
|---|
Most Cell-Type Specific cREs
| Rank | cRE | Specificity | Entropy | Cell Type Share | Mean CPM |
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Motif Deviations
| Rank | Motif | Motif ID | Deviation Score |
|---|
Top Differentially Expressed Genes
| Gene | log2 Fold Change | lfcSE | Base Mean | P-value | Adjusted P-value |
|---|
Cell-Level Browser
Disease page
Credible Sets
| Variant | rsID | Locus ID | Beta | P-value | PIP | Linked cRE Target Genes | Overlaps Linked cRE | Predicted Effect |
|---|
Differential Expression by Cell Type
| Gene | Direction | log2 Fold Change | lfcSE | Base Mean | P-value | Adjusted P-value |
|---|
Pathway Enrichment
| Source | Pathway | NES | P-value | Adjusted P-value | Genes | Leading Edge |
|---|
Pathway page
Source
Pathway ID
Genes
Enrichment Across Cell Types
| Disease / Trait | Cell Type | NES | P-value | Adjusted P-value | Leading Edge |
|---|
Member Genes
| Gene |
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